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  5. Ore_g05642

Ore_g05642


Description : assembly factor CcsB of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0005948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g05642
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00156080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
AT1G49380 No alias cytochrome c biogenesis protein family 0.08 OrthoFinder output from all 47 species
Adi_g012769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.1 OrthoFinder output from all 47 species
Aev_g03192 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ala_g05684 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Aob_g16302 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Aspi01Gene04834.t1 Aspi01Gene04834 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ceric.13G010200.1 Ceric.13G010200 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Cre13.g575000 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Dac_g03338 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Dcu_g03888 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.11 OrthoFinder output from all 47 species
Dde_g26694 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Ehy_g04866 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
GSVIVT01031911001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Gb_26769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Lfl_g19291 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
MA_10434753g0010 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.12 OrthoFinder output from all 47 species
Mp3g21290.1 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Nbi_g19038 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Pir_g61712 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Pnu_g11622 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Sam_g04076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52379 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Smo52887 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Solyc10g051200.2.1 Solyc10g051200 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Tin_g14096 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Zm00001e005813_P001 Zm00001e005813 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 99 365
IPR007816 ResB-like_domain 404 511
No external refs found!