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  5. Ore_g04962

Ore_g04962 (FRL1)


Aliases : FRL1

Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04962

Target Alias Description ECC score Gene Family Method Actions
Adi_g014978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_24860 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10436820g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_105292g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g06900.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g01067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026441 No alias not classified & original description: CDS=224-2032 0.02 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009308_P001 Zm00001e009308 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033632_P002 Zm00001e033632 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e035443_P001 Zm00001e035443 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP HCCA
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 152 438
No external refs found!