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  5. Ore_g04612

Ore_g04612


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04612

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G17200 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
Adi_g005547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18231.t1 Aspi01Gene18231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025274 No alias not classified & original description: CDS=467-1165 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.04 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.03 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.06 OrthoFinder output from all 47 species
Ceric.11G056300.1 Ceric.11G056300 not classified & original description: pacid=50596699... 0.03 OrthoFinder output from all 47 species
Ceric.23G007900.1 Ceric.23G007900 not classified & original description: pacid=50611019... 0.02 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_02196 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g10030.1 LOC_Os03g10030 CASP-like protein Os03g0196400 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os04g21320.1 LOC_Os04g21320 CASP-like protein 2A1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g32249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_37849g0010 No alias CASP-like protein 2A1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.03 OrthoFinder output from all 47 species
Msp_g06626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007556 No alias not classified & original description: CDS=113-772 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019924 No alias not classified & original description: CDS=83-670 0.03 OrthoFinder output from all 47 species
Sam_g17546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g054190.4.1 Solyc05g054190 CASP-like protein 2B1 OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc07g006855.2.1 Solyc07g006855 CASP-like protein 2C1 OS=Populus trichocarpa... 0.06 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013801_P001 Zm00001e013801 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004615 phosphomannomutase activity IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 4 148
No external refs found!