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  5. Ore_g04383

Ore_g04383


Description : zinc metalloprotease *(PGM48) & original description: none


Gene families : OG0007941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04383
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G27110 No alias Peptidase family M48 family protein 0.03 OrthoFinder output from all 47 species
Adi_g115621 No alias zinc metalloprotease *(PGM48) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10686 No alias zinc metalloprotease *(PGM48) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01491 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01166 No alias zinc metalloprotease *(PGM48) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26908 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
Cre14.g620150 No alias Protein degradation.peptidase families.metallopeptidase... 0.01 OrthoFinder output from all 47 species
Dde_g07047 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033097001 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
Nbi_g17470 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09361 No alias zinc metalloprotease *(PGM48) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24488 No alias zinc metalloprotease *(PGM48) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g005000.4.1 Solyc03g005000 zinc metalloprotease (PGM48) 0.06 OrthoFinder output from all 47 species
Zm00001e017196_P001 Zm00001e017196 zinc metalloprotease (PGM48) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001915 Peptidase_M48 116 310
No external refs found!