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  5. Ore_g04320

Ore_g04320 (SSL5, YLS2)


Aliases : SSL5, YLS2

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0001226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00067420 evm_27.TU.AmTr_v1... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.02 OrthoFinder output from all 47 species
AMTR_s00147p00094600 ATSSL4, SSL4,... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.02 OrthoFinder output from all 47 species
Aop_g07517 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49250.t1 ATSSL4, SSL4,... EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G037600.1 Ceric.35G037600 not classified & original description: pacid=50581399... 0.02 OrthoFinder output from all 47 species
Dac_g19369 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015058001 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_02716 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_04241 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_04243 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39710.1 SSL5, YLS2,... Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_488133g0010 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pp3c16_11140V3.1 Pp3c16_11140 Calcium-dependent phosphotriesterase superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023248 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: CDS=177-1307 0.02 OrthoFinder output from all 47 species
Smo136874 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g082900.3.1 Solyc02g082900 Protein STRICTOSIDINE SYNTHASE-LIKE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 149 235
No external refs found!