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  5. Ore_g04015

Ore_g04015 (SKIP6)


Aliases : SKIP6

Description : substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04015
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00211260 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g04313 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aop_g04885 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g19858 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015430 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc04g051870.3.1 SKIP6, Solyc04g051870 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004803_P001 Zm00001e004803 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 97 139
IPR006652 Kelch_1 142 187
IPR001810 F-box_dom 12 45
No external refs found!