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  5. Ore_g03883

Ore_g03883 (PTAC12, HMR)


Aliases : PTAC12, HMR

Description : transcriptional coactivator *(HEMERA) & original description: none


Gene families : OG0007916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007916_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03883

Target Alias Description ECC score Gene Family Method Actions
AT2G34640 PTAC12, HMR plastid transcriptionally active 12 0.02 OrthoFinder output from all 47 species
GSVIVT01021555001 PTAC12, HMR RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
LOC_Os01g56350.3 PTAC12, HMR,... PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.04 OrthoFinder output from all 47 species
Len_g22717 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g05496 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
MA_8815984g0010 PTAC12, HMR PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.04 OrthoFinder output from all 47 species
Mp1g24680.1 PTAC12, HMR PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.03 OrthoFinder output from all 47 species
Ppi_g42137 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g070390.3.1 PTAC12, HMR,... PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.02 OrthoFinder output from all 47 species
Tin_g27291 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e019697_P001 PTAC12, HMR,... PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!