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  5. Ore_g03878

Ore_g03878


Description : not classified & original description: none


Gene families : OG0002416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002416_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03878
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Als_g03628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000334.13 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre11.g467738 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014407001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00884 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g38730.1 LOC_Os03g38730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g14600.1 LOC_Os09g14600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g17501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc07g063430.3.1 Solyc07g063430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g008500.4.1 Solyc10g008500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g02623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004901_P001 Zm00001e004901 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e012491_P002 Zm00001e012491 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR007248 Mpv17_PMP22 271 332
No external refs found!