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  5. Ore_g03758

Ore_g03758


Description : FSD2-interacting component of plastid-encoded RNA polymerase & original description: none


Gene families : OG0005190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03758
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00062400 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
AT5G48470 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Adi_g053032 No alias FSD2-interacting component of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Aev_g04008 No alias FSD2-interacting component of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Ala_g06367 No alias FSD2-interacting component of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15375.t1 Aspi01Gene15375 FSD2-interacting component of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
Azfi_s0420.g069157 No alias FSD2-interacting component of plastid-encoded RNA... 0.06 OrthoFinder output from all 47 species
Ceric.02G105600.1 Ceric.02G105600 FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Dcu_g12851 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Ehy_g03442 No alias FSD2-interacting component of plastid-encoded RNA... 0.04 OrthoFinder output from all 47 species
LOC_Os11g23790.1 LOC_Os11g23790 FSD2-interacting component of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Nbi_g11506 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Pnu_g09143 No alias FSD2-interacting component of plastid-encoded RNA... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007564 No alias FSD2-interacting component of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!