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  5. Ore_g03212

Ore_g03212


Description : not classified & original description: none


Gene families : OG0003461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03212
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Aob_g01828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017789_P001 Zm00001e017789 Protein RETICULATA-RELATED 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e039649_P001 Zm00001e039649 Protein RETICULATA-RELATED 1, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 263 431
No external refs found!