Aliases : RR2, ARR2
Description : not classified & original description: none
Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g02469 | |
Cluster | HCCA: Cluster_134 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Azfi_s0005.g009393 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.03 | OrthoFinder output from all 47 species | |
Cre02.g083750 | LUX, PCL1 | Transcription factor BOA OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g04944 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010300001 | ARR11 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g26540 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g47537 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016123_P001 | RR12, ARR12,... | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001789 | Sig_transdc_resp-reg_receiver | 48 | 103 |
No external refs found! |