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  5. Ore_g02442

Ore_g02442 (SECE1)


Aliases : SECE1

Description : component *(SecE1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0007405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007405_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g02442
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Dac_g04504 SECE1 component *(SecE1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Dde_g01208 SECE1 component *(SecE1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Len_g03624 SECE1 component *(SecE1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Len_g23717 No alias component *(SecE1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
MA_158153g0010 SECE1 component SecE1 of thylakoid membrane Sec1 translocation system 0.03 OrthoFinder output from all 47 species
Ore_g17843 SECE1 component *(SecE1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ppi_g02687 SECE1 component *(SecE1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001901 Translocase_SecE/Sec61-g 33 83
No external refs found!