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  5. Ore_g01735

Ore_g01735 (PVA12)


Aliases : PVA12

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g01735
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Adi_g080054 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Als_g05559 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Ceric.22G049200.1 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Cre03.g196900 VAP27, VAP27-1,... Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01027643001 No alias Vesicle-associated protein 1-3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Msp_g10884 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Sam_g18032 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Smo438734 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Zm00001e012869_P001 Zm00001e012869 Vesicle-associated protein 2-1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 107
No external refs found!