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  5. Ore_g01508

Ore_g01508


Description : not classified & original description: none


Gene families : OG0002439 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002439_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g01508

Target Alias Description ECC score Gene Family Method Actions
Ore_g00110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g00179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05096 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g11235 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14254 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g14712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44601 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 96 111
No external refs found!