Aliases : ATU2AF65A
Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none
Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g039505 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g117015 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g02552 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
Als_g02503 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Als_g07361 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Als_g10024 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Als_g38682 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene49467.t1 | Aspi01Gene49467 | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0104.g044794 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g12276 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g38521 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G010500.1 | ATU2AF65A,... | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
Cre09.g391949 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g03340 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g05606 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g13843 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g48783 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g11336 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Len_g30816 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04836 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g19286 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g19287 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Mp6g18910.1 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g35208 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g05675 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g16504 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g61224 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g09275 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Smo160385 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g062920.3.1 | ATU2AF65A, Solyc02g062920 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g085570.4.1 | ATU2AF65A, Solyc02g085570 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g008750.3.1 | Solyc12g008750 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.02 | OrthoFinder output from all 47 species | |
Spa_g18763 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g26890 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g03341 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g05158 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e021000_P006 | Zm00001e021000 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005680 | anaphase-promoting complex | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |