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Aliases : RPL16A
Description : component *(uL5) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001936_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g63573 | |
| Cluster | HCCA: Cluster_280 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00200160 | RPL16A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00203150 | RPL16A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G58700 | No alias | Ribosomal L5P family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18730 | RPL16B | ribosomal protein L16B | 0.02 | OrthoFinder output from all 47 species | |
| AT5G45775 | No alias | Ribosomal L5P family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080914 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17681 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30852 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30844 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70327 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0350.g066549 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G112300.1 | RPL16A, Ceric.02G112300 | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020610.38 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01020743001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021244001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_08546 | RPL16A | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g10820.1 | RPL16A, LOC_Os01g10820 | component RPL11 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g11710.1 | RPL16A, LOC_Os05g11710 | component RPL11 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g35730.1 | RPL16A, LOC_Os06g35730 | component RPL11 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g24740.1 | RPL16A | component RPL11 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g18870.1 | RPL16A | component RPL11 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c7_20160V3.1 | RPL16A, Pp3c7_20160 | ribosomal protein large subunit 16A | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g17383 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Smo444767 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g055230.4.1 | RPL16A, Solyc07g055230 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g010930.2.1 | RPL16A, Solyc12g010930 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07232 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22809 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25528 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30816 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g02344 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024913_P001 | RPL16A, Zm00001e024913 | component RPL11 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026886_P003 | RPL16A, Zm00001e026886 | component RPL11 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e037255_P001 | RPL16A, Zm00001e037255 | component RPL11 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0030008 | TRAPP complex | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| No external refs found! |