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  5. Aev_g14267

Aev_g14267


Description : not classified & original description: none


Gene families : OG0002966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g14267
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT5G24740 No alias Protein of unknown function (DUF1162) 0.03 OrthoFinder output from all 47 species
Adi_g011972 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g05069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0359.g066851 No alias not classified & original description: CDS=121-8928 0.03 OrthoFinder output from all 47 species
Ceric.03G037800.1 Ceric.03G037800 not classified & original description: pacid=50571745... 0.04 OrthoFinder output from all 47 species
Cre17.g727600 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g05849 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019366001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_28330 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10433645g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10435329g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_174037g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g13250.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g16296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439148 No alias No description available 0.05 OrthoFinder output from all 47 species
Spa_g22653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029198_P001 Zm00001e029198 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029204_P001 Zm00001e029204 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR031645 VPS13_DH-like 2656 2832
IPR009543 VPS13_VAB 2085 2338
IPR031646 VPS13_extend_chorein 139 377
IPR026854 VPS13-like_N 2 115
IPR031642 VPS13_mid_RBG 652 896
No external refs found!