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  5. Ppi_g62657

Ppi_g62657 (SE)


Aliases : SE

Description : component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex & original description: none


Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g62657

Target Alias Description ECC score Gene Family Method Actions
AT2G27100 SE C2H2 zinc-finger protein SERRATE (SE) 0.03 OrthoFinder output from all 47 species
Adi_g061118 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Als_g04823 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Als_g26903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02258 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07777.t1 SE, Aspi01Gene07777 component *(SERRATE) of DCL1-HYL1 miRNA bioGenesis... 0.03 OrthoFinder output from all 47 species
Cba_g20740 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.04 OrthoFinder output from all 47 species
Ceric.03G039000.1 SE, Ceric.03G039000 component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.05 OrthoFinder output from all 47 species
Dde_g10898 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Ehy_g08633 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.04 OrthoFinder output from all 47 species
GSVIVT01027348001 SE RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Gb_37971 SE C2H2 zinc finger transcription factor. component SERRATE... 0.03 OrthoFinder output from all 47 species
LOC_Os06g48530.1 SE, LOC_Os06g48530 C2H2 zinc finger transcription factor. component SERRATE... 0.04 OrthoFinder output from all 47 species
LOC_Os08g40560.1 SE, LOC_Os08g40560 C2H2 zinc finger transcription factor. component SERRATE... 0.02 OrthoFinder output from all 47 species
Lfl_g02072 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.04 OrthoFinder output from all 47 species
Mp1g23090.1 SE C2H2 zinc finger transcription factor. component SERRATE... 0.02 OrthoFinder output from all 47 species
Tin_g09411 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR007042 SERRATE/Ars2_C 423 661
IPR021933 SERRATE/Ars2_N 194 276
No external refs found!