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  5. Ppi_g62350

Ppi_g62350


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g62350
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00256130 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00162370 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g023030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g029282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g53257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11108.t1 Aspi01Gene11108 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21045.t1 Aspi01Gene21045 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60159.t1 Aspi01Gene60159 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.04 OrthoFinder output from all 47 species
Dac_g07418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431396g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_370291g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g14258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015595 No alias not classified & original description: CDS=1-1779 0.03 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e018023_P001 Zm00001e018023 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e026116_P001 Zm00001e026116 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 417 450
IPR001680 WD40_repeat 357 392
IPR001680 WD40_repeat 299 334
No external refs found!