Ppi_g61204 (OBP4)

Aliases : OBP4

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g61204
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00264070	CDF3,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT1G07640	OBP2	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT1G28310	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT1G64620	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.03	OrthoFinder output from all 47 species
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
Adi_g007394	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g016287	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g074897	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g086178	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g106349	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g24071	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g13677	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11555	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08641	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g36307	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47016.t1	CDF2, Aspi01Gene47016	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66325.t1	OBP3, Aspi01Gene66325	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s4159.g118156	TMO6	transcription factor *(DOF) & original description: CDS=1-876	0.03	OrthoFinder output from all 47 species
Cba_g00291	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g04480	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g57567	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.12G042700.1	TMO6, Ceric.12G042700	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.22G032900.1	TMO6, Ceric.22G032900	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.26G037300.1	TMO6, Ceric.26G037300	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g17628	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g01245	CDF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12722	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g28530	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01005057001	TMO6	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
GSVIVT01007758001	HCA2, DOF5.6	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01016538001	OBP3	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.07	OrthoFinder output from all 47 species
LOC_Os01g09720.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g17000.1	CDF2, LOC_Os01g17000	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g64590.1	LOC_Os01g64590	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g49440.1	ADOF1, DOF1,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g55610.1	ADOF2, DOF2,...	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os04g47990.1	LOC_Os04g47990	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os12g38200.1	LOC_Os12g38200	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Len_g20781	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g29714	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g04824	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
MA_16692g0010	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
MA_56828g0010	No alias	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
MA_83624g0010	TMO6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
MA_939289g0010	ADOF2, DOF2	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Mp2g20790.1	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Msp_g11443	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g32354	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g41458	OBP4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g18788	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03743	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g26799	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g50151	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g077950.3.1	Solyc02g077950	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc02g077960.3.1	TMO6, Solyc02g077960	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g090220.3.1	OBP1, Solyc02g090220	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g082840.3.1	DAG1, Solyc03g082840	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc03g115940.4.1	CDF3, Solyc03g115940	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g075370.3.1	TMO6, Solyc06g075370	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc08g082910.2.1	Solyc08g082910	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc10g009360.4.1	DAG1, Solyc10g009360	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc10g086440.2.1	DOF2.4,...	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc11g072500.2.1	TMO6, Solyc11g072500	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Spa_g18028	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26148	CDF1	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g32905	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g54524	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000526_P001	CDF3, Zm00001e000526	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e001988_P001	TMO6, Zm00001e001988	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e002951_P002	Zm00001e002951	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e005785_P001	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e007228_P002	Zm00001e007228	transcription factor (DOF)	0.08	OrthoFinder output from all 47 species
Zm00001e010454_P001	TMO6, Zm00001e010454	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e015597_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e018163_P001	Zm00001e018163	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e023334_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e028042_P002	Zm00001e028042	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e041944_P001	Zm00001e041944	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
CC	GO:0070652	HAUS complex	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	37	93

External Links

No external refs found!

Ppi_g61204 (OBP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation