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  5. Ppi_g60880

Ppi_g60880


Description : not classified & original description: none


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g60880
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G28150 No alias Domain of unknown function (DUF966) 0.04 OrthoFinder output from all 47 species
AT3G46110 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
Adi_g106265 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g37634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18845.t1 Aspi01Gene18845 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19661.t1 Aspi01Gene19661 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25837.t1 Aspi01Gene25837 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34495.t1 Aspi01Gene34495 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene58852.t1 Aspi01Gene58852 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g010179 No alias not classified & original description: CDS=245-2059 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029962 No alias not classified & original description: CDS=1-2628 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.02 OrthoFinder output from all 47 species
Ceric.01G003700.1 Ceric.01G003700 not classified & original description: pacid=50590972... 0.04 OrthoFinder output from all 47 species
Ceric.03G030000.1 Ceric.03G030000 not classified & original description: pacid=50571333... 0.03 OrthoFinder output from all 47 species
Ceric.13G026100.1 Ceric.13G026100 not classified & original description: pacid=50635606... 0.04 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g06611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005997001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_35177 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g62200.1 LOC_Os01g62200 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g74370.1 LOC_Os01g74370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g09200.1 LOC_Os03g09200 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g23097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g13130.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g13652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39402 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010278 No alias not classified & original description: CDS=116-3175 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024671 No alias not classified & original description: CDS=409-2136 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026164 No alias not classified & original description: CDS=287-2665 0.03 OrthoFinder output from all 47 species
Sam_g48272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo412562 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g054800.3.1 Solyc04g054800 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g030470.4.1 Solyc06g030470 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g075690.3.1 Solyc06g075690 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g066380.3.1 Solyc11g066380 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g06916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g10667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000820_P002 Zm00001e000820 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e003892_P002 Zm00001e003892 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e005317_P002 Zm00001e005317 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e019641_P005 Zm00001e019641 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022043_P001 Zm00001e022043 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027133_P001 Zm00001e027133 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 31 319
No external refs found!