Zm00001d033799 (GRMZM2G157727)


Aliases : GRMZM2G157727

Description : 30.11 signalling.light Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.


Gene families : OG_01_0000639 (Gene family) Phylogenetic Tree(s): OG0000639_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d033799
Cluster HCCA cluster: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Smo161430 PACid_15401681 30.11 signalling.light Red/far-red photoreceptor... 0.04 Gene family
Zm00001d008542 No alias 30.11 signalling.light Light-labile cytoplasmic... 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013654 PAS_2 70 186
IPR003018 GAF 220 403
IPR003594 HATPase_C 1011 1122
IPR013515 Phytochrome_cen-reg 418 590
IPR013767 PAS_fold 623 737
IPR013767 PAS_fold 753 875
No external refs found!