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  5. Ppi_g60107

Ppi_g60107 (STI)


Aliases : STI

Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g60107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00247620 STI,... Protein STICHEL OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00099080 evm_27.TU.AmTr_v1... Protein STICHEL-like 4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT4G24790 No alias AAA-type ATPase family protein 0.03 OrthoFinder output from all 47 species
Adi_g014264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04881 STI not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g26395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51975 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17546 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17547 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35944.t2 STI, Aspi01Gene35944 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41148.t1 STI, Aspi01Gene41148 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59566.t1 STI, Aspi01Gene59566 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G078500.1 STI, Ceric.09G078500 not classified & original description: pacid=50587415... 0.04 OrthoFinder output from all 47 species
Ceric.14G036000.1 STI, Ceric.14G036000 not classified & original description: pacid=50633102... 0.07 OrthoFinder output from all 47 species
Ceric.29G056200.1 STI, Ceric.29G056200 not classified & original description: pacid=50625591... 0.04 OrthoFinder output from all 47 species
Dcu_g07167 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09568 STI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12024 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12337 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19715 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_15491g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_34437g0010 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_34437g0020 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_64150g0010 STI Protein STICHEL-like 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g02122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32517 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39999 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008500 No alias iron-sulphur component *(SDH2) of succinate... 0.03 OrthoFinder output from all 47 species
Solyc03g111680.3.1 Solyc03g111680 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04713 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g09096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11201 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24966 STI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e019906_P002 Zm00001e019906 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028231_P002 Zm00001e028231 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039775_P001 STI, Zm00001e039775 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 588 651
No external refs found!