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  5. Ppi_g59728

Ppi_g59728


Description : not classified & original description: none


Gene families : OG0002552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g59728

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00162150 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00064p00123160 evm_27.TU.AmTr_v1... RNA processing.RNA modification.tRNA... 0.03 OrthoFinder output from all 47 species
AT5G56980 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aop_g30175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037153_P001 Zm00001e037153 component BUD32 of tRNA N6-threonylcarbamoylation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR025520 DUF4408 91 121
IPR008480 DUF761_pln 231 265
No external refs found!