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  5. Ppi_g59351

Ppi_g59351


Description : nucleocytoplasmic transport karyopherin *(XPO4) & original description: none


Gene families : OG0004951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004951_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g59351

Target Alias Description ECC score Gene Family Method Actions
Als_g12362 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Ceric.34G048300.1 Ceric.34G048300 nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species
Dcu_g51248 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species
Dde_g22178 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Lfl_g36174 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.04 OrthoFinder output from all 47 species
Mp6g21410.1 No alias XPO4 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Nbi_g11820 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Tin_g45950 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 31 96
IPR014877 XPO1_C_dom 951 1033
No external refs found!