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  5. Ppi_g59221

Ppi_g59221


Description : not classified & original description: none


Gene families : OG0007302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g59221
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT2G44920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g053093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20783 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g11060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16139 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene24909.t1 Aspi01Gene24909 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G001200.1 Ceric.01G001200 not classified & original description: pacid=50590454... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001628.6 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.57 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Dac_g27653 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g13753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016495001 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os01g05080.1 LOC_Os01g05080 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g19840 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10232509g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
MA_503287g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp7g06080.1 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g06581 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g14110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022678 No alias not classified & original description: CDS=682-1350 0.03 OrthoFinder output from all 47 species
Sam_g04963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo76876 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g39405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14674 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e025798_P001 Zm00001e025798 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 117 156
No external refs found!