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  5. Ppi_g56806

Ppi_g56806


Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56806
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Als_g11897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34196.t1 OPCL1, Aspi01Gene34196 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63196.t1 OPCL1, Aspi01Gene63196 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63198.t1 OPCL1, Aspi01Gene63198 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1020.g095355 No alias not classified & original description: CDS=69-1760 0.02 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.01 OrthoFinder output from all 47 species
Gb_19734 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Len_g38035 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08577 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23419 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc08g076300.3.1 Solyc08g076300 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g07437 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 38 302
No external refs found!