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  5. Ppi_g56213

Ppi_g56213 (RAP2.11)


Aliases : RAP2.11

Description : transcription factor *(ERN1) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00143340 ERF1, ATERF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G43160 RAP2.6 related to AP2 6 0.02 OrthoFinder output from all 47 species
AT4G11140 CRF1 cytokinin response factor 1 0.02 OrthoFinder output from all 47 species
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g018599 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g04104 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g45354 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Als_g46307 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g49275 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51423 HRE2 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24329.t1 Aspi01Gene24329 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24330.t1 Aspi01Gene24330 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41926.t1 RAP2.11, Aspi01Gene41926 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46667.t1 Aspi01Gene46667 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46671.t1 Aspi01Gene46671 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53875.t1 DEAR4, RAP2.10,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53903.t1 Aspi01Gene53903 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53915.t1 Aspi01Gene53915 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61386.t1 DEAR3, Aspi01Gene61386 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0056.g034097 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g13419 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G043500.1 HRE2, Ceric.15G043500 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.30G071700.1 HRE2, Ceric.30G071700 not classified & original description: pacid=50607972... 0.04 OrthoFinder output from all 47 species
Dac_g08898 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18160 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Dcu_g18823 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45986 DREB26 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g17722 RAP2.6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26103 RAP2.6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_23321 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_34844 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g44670.1 LOC_Os04g44670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g11940.1 LOC_Os06g11940 Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28440.1 RRTF1, LOC_Os09g28440 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g35010.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1B... 0.03 OrthoFinder output from all 47 species
Len_g02672 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g08670 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Lfl_g10237 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_5805979g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_924346g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Msp_g10836 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g26932 ATERF13, ERF13, EREBP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17524 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012392 No alias not classified & original description: CDS=107-2506 0.03 OrthoFinder output from all 47 species
Solyc03g005500.1.1 ERF14, ATERF14,... transcription factor (ERF). transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc06g063070.3.1 RAP2.12, Solyc06g063070 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g068830.2.1 Solyc06g068830 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc09g089930.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc12g056980.1.1 RAP2.4, Solyc12g056980 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Spa_g06936 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08163 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g15143 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g51954 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Spa_g52109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000609_P001 RAP2.2, Zm00001e000609 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e030279_P001 ATERF3, ERF3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e031438_P002 HRE2, Zm00001e031438 Ethylene-responsive transcription factor RAP2-3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 172 221
No external refs found!