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Ppi_g55921


Description : component *(COX6b) of cytochrome c oxidase complex & original description: none


Gene families : OG0001692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g55921

Target Alias Description ECC score Gene Family Method Actions
AT1G22450 ATCOX6B2, COX6B cytochrome C oxidase 6B 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.7 No alias Cellular respiration.oxidative... 0.02 OrthoFinder output from all 47 species
Cre06.g304350 ATCOX6B2, COX6B Cellular respiration.oxidative... 0.01 OrthoFinder output from all 47 species
Msp_g28261 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g24245 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Spa_g17081 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e001884_P002 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species
Zm00001e037987_P004 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003213 Cyt_c_oxidase_su6B 68 127
No external refs found!