1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g55140

Ppi_g55140 (GL19, AGL19)


Aliases : GL19, AGL19

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g55140

Target Alias Description ECC score Gene Family Method Actions
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from all 47 species
Aev_g17392 AGL71 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000802001 SHP2, AGL5 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01012249001 AGL2, SEP1 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66030.1 PI, LOC_Os01g66030 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os06g01890.1 SOC1, AGL20,... transcription factor (MADS/AGL) 0.07 OrthoFinder output from all 47 species
Lfl_g36481 No alias MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_347547g0010 SOC1, AGL20, ATSOC1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5917g0010 AGL9, SEP3 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
MA_6279308g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Nbi_g29014 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089200.4.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc05g015750.3.1 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 141 212
IPR002100 TF_MADSbox 65 111
No external refs found!