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  5. Ppi_g55035

Ppi_g55035 (QQT2)


Aliases : QQT2

Description : RNA polymerase-II nuclear import factor *(GPN1) & original description: none


Gene families : OG0005811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g55035
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.99 QQT2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.01 OrthoFinder output from all 47 species
Dac_g46329 QQT2 RNA polymerase-II nuclear import factor *(GPN1) &... 0.04 OrthoFinder output from all 47 species
Pir_g26746 QQT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20154 QQT2 RNA polymerase-II nuclear import factor *(GPN1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004130 Gpn 2 216
No external refs found!