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  5. Aev_g13357

Aev_g13357 (RHM1, ROL1, ATRHM1)


Aliases : RHM1, ROL1, ATRHM1

Description : UDP-L-rhamnose synthase *(RHM) & original description: none


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g13357
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00150410 RHM1, ROL1,... Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
AT1G53500 ATRHM2, RHM2,... NAD-dependent epimerase/dehydratase family protein 0.03 OrthoFinder output from all 47 species
Als_g05083 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14366 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035479 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: CDS=1-1959 0.06 OrthoFinder output from all 47 species
Ceric.13G016100.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.15G004900.1 ATRHM2, RHM2,... UDP-L-rhamnose synthase *(RHM) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.24G062900.1 RHM1, ROL1,... UDP-L-rhamnose synthase *(RHM) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G035200.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.02 OrthoFinder output from all 47 species
Cre09.g387171 NRS/ER, UER1 Carbohydrate metabolism.nucleotide sugar... 0.01 OrthoFinder output from all 47 species
GSVIVT01014091001 ATRHM3, RHM3 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Len_g10910 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10105635g0010 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
MA_10431083g0010 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
MA_217856g0010 NRS/ER, UER1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
Mp1g04880.1 NRS/ER, UER1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Mp6g02720.1 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Pnu_g23614 ATRHM3, RHM3 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10663 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50767 No alias UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g069110.3.1 RHM1, ROL1,... UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Spa_g05877 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24187 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015435_P001 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 384 556
IPR016040 NAD(P)-bd_dom 12 317
No external refs found!