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  5. Ppi_g53665

Ppi_g53665


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g53665

Target Alias Description ECC score Gene Family Method Actions
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g058477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46627.t1 Aspi01Gene46627 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G040000.1 Ceric.03G040000 not classified & original description: pacid=50571445... 0.03 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Msp_g07384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008612 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR002653 Znf_A20 22 45
IPR000058 Znf_AN1 101 137
No external refs found!