Aliases : EMB1080
Description : component *(uS17) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001674 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001674_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00033p00158320 | EMB1080,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
AMTR_s00046p00028310 | EMB1080,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
AT3G48930 | EMB1080 | Nucleic acid-binding, OB-fold-like protein | 0.06 | OrthoFinder output from all 47 species | |
AT4G30800 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G23740 | RPS11-BETA | ribosomal protein S11-beta | 0.06 | OrthoFinder output from all 47 species | |
Adi_g014139 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g021180 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g17880 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g34347 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g57630 | RPS11-BETA | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g63595 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g06312 | EMB1080 | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g40420 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0268.g061080 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G042300.1 | Ceric.02G042300 | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.06G039400.1 | Ceric.06G039400 | component *(uS17) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000551.22 | EMB1080 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
Cre12.g514500 | EMB1080 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
Dac_g01981 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g09040 | EMB1080 | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g22249 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012877001 | EMB1080 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01035927001 | EMB1080 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
Gb_14912 | EMB1080 | component RPS11 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g52361.1 | EMB1080, LOC_Os04g52361 | component RPS11 of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os08g10608.1 | RPS11-BETA,... | component RPS11 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Len_g03065 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
MA_19350g0010 | EMB1080 | component RPS11 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
Mp4g23360.1 | EMB1080 | component RPS11 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
Mp6g10500.1 | EMB1080 | component RPS11 of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
Msp_g22593 | RPS11-BETA | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g01705 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g01738 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c1_27980V3.1 | EMB1080, Pp3c1_27980 | Nucleic acid-binding, OB-fold-like protein | 0.09 | OrthoFinder output from all 47 species | |
Pp3c2_13690V3.1 | EMB1080, Pp3c2_13690 | Nucleic acid-binding, OB-fold-like protein | 0.04 | OrthoFinder output from all 47 species | |
Pp3s116_30V3.1 | EMB1080, Pp3s116_30 | Nucleic acid-binding, OB-fold-like protein | 0.05 | OrthoFinder output from all 47 species | |
Smo268639 | EMB1080 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g073790.3.1 | Solyc06g073790 | component RPS11 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g073800.3.1 | Solyc06g073800 | component RPS11 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
Solyc12g042080.2.1 | Solyc12g042080 | component RPS11 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
Spa_g31268 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g44672 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006955_P001 | RPS11-BETA,... | component RPS11 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e041635_P001 | RPS11-BETA,... | component RPS11 of SSU proteome | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | HCCA |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0019900 | kinase binding | IEP | HCCA |
MF | GO:0019901 | protein kinase binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
BP | GO:0042325 | regulation of phosphorylation | IEP | HCCA |
BP | GO:0043549 | regulation of kinase activity | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
BP | GO:0045859 | regulation of protein kinase activity | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051338 | regulation of transferase activity | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |