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  5. Ppi_g49571

Ppi_g49571


Description : histone *(H4) & original description: none


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g49571

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0003.g007998 No alias histone *(H4) & original description: CDS=1-342 0.02 OrthoFinder output from all 47 species
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
MA_89764g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Mp4g03090.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Pnu_g12308 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012615 No alias histone *(H4) & original description: CDS=1-477 0.02 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc11g072860.2.1 Solyc11g072860 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e007138_P001 Zm00001e007138 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e016816_P001 Zm00001e016816 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e025845_P001 Zm00001e025845 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e034229_P001 Zm00001e034229 histone (H4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 39 96
No external refs found!