LOC_Os12g08800.1


Description : LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal


Gene families : OG_01_0005081 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005081_tree ,
OG_02_0005123 (LandPlants) Phylogenetic Tree(s): OG_02_0005123_tree ,
OG_03_0004927 (SeedPlants) Phylogenetic Tree(s): OG_03_0004927_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g08800.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT5G12220 No alias las1-like family protein 0.06 Archaeplastida
Cre01.g002201 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Gb_08337 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.02 Archaeplastida
Solyc07g045370.3.1 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.03 Archaeplastida
Zm00001e019521_P001 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.03 Archaeplastida
AT5G12220 No alias las1-like family protein 0.06 LandPlants
Solyc07g045370.3.1 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.03 LandPlants
Zm00001e019521_P001 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.02 LandPlants
AT5G12220 No alias las1-like family protein 0.06 SeedPlants
Gb_08337 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.01 SeedPlants
Solyc07g045370.3.1 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.03 SeedPlants
Zm00001e019521_P001 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0090730 Las1 complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007174 Las1 26 173
No external refs found!