Ppi_g46522 (RFC3)


Aliases : RFC3

Description : not classified & original description: none


Gene families : OG0007901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007901_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g46522
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00065640 RFC3,... No description available 0.03 OrthoFinder output from all 47 species
Ceric.35G040500.1 RFC3, Ceric.35G040500 not classified & original description: pacid=50580923... 0.03 OrthoFinder output from all 47 species
GSVIVT01034952001 RFC3 No description available 0.04 OrthoFinder output from all 47 species
LOC_Os12g37610.1 RFC3, LOC_Os12g37610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g17154 RFC3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9569g0010 RFC3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g09569 RFC3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14530 RFC3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g058190.4.1 RFC3, Solyc01g058190 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g04186 RFC3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018204_P001 RFC3, Zm00001e018204 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 85 172
No external refs found!