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  5. Ppi_g46233

Ppi_g46233


Description : assembly factor IBA57.2 of plastidial SUF system transfer phase & original description: none


Gene families : OG0006303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g46233
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Als_g08515 No alias assembly factor IBA57.2 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Dac_g12353 No alias assembly factor IBA57.2 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Len_g02262 No alias assembly factor IBA57.2 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Lfl_g01249 No alias assembly factor IBA57.2 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Mp3g16870.1 No alias assembly factor IBA57 of plastidial SUF system transfer phase 0.03 OrthoFinder output from all 47 species
Nbi_g21031 No alias assembly factor IBA57.2 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Ore_g11231 No alias assembly factor IBA57.2 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Pp3c9_20800V3.1 Pp3c9_20800 Glycine cleavage T-protein family 0.01 OrthoFinder output from all 47 species
Spa_g10115 No alias assembly factor IBA57.2 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006222 GCV_T_N 70 310
IPR013977 GCV_T_C 339 398
No external refs found!