1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g06520.1

LOC_Os12g06520.1


Description : transcription factor (bZIP)


Gene families : OG_01_0000167 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000167_tree ,
OG_02_0000303 (LandPlants) Phylogenetic Tree(s): OG_02_0000303_tree ,
OG_03_0001327 (SeedPlants) Phylogenetic Tree(s): OG_03_0001327_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06520.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s04408p00000200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.03 Archaeplastida
AT1G43700 SUE3, VIP1 VIRE2-interacting protein 1 0.03 Archaeplastida
GSVIVT01024160001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.03 Archaeplastida
GSVIVT01034897001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 Archaeplastida
Gb_28107 No alias transcription factor (bZIP) 0.02 Archaeplastida
LOC_Os12g09250.1 No alias transcription factor (bZIP) 0.05 Archaeplastida
Pp3c19_15700V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.04 Archaeplastida
Pp3c19_15710V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.04 Archaeplastida
Solyc01g103873.1.1 No alias transcription factor (bZIP) 0.04 Archaeplastida
Solyc01g110480.4.1 No alias transcription factor (bZIP) 0.07 Archaeplastida
Solyc06g049040.4.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
Solyc07g053450.4.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
Zm00001e018402_P003 No alias transcription factor (bZIP) 0.06 Archaeplastida
Zm00001e018460_P001 No alias transcription factor (bZIP) 0.06 Archaeplastida
Zm00001e024638_P002 No alias transcription factor (bZIP) 0.05 Archaeplastida
AMTR_s00185p00050380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.02 LandPlants
AT1G43700 SUE3, VIP1 VIRE2-interacting protein 1 0.03 LandPlants
GSVIVT01034897001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 LandPlants
Pp3c19_15700V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.04 LandPlants
Pp3c19_15710V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.04 LandPlants
Pp3c22_13840V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.01 LandPlants
Solyc01g110480.4.1 No alias transcription factor (bZIP) 0.05 LandPlants
Solyc06g049040.4.1 No alias transcription factor (bZIP) 0.03 LandPlants
Zm00001e018460_P001 No alias transcription factor (bZIP) 0.06 LandPlants
Zm00001e024638_P002 No alias transcription factor (bZIP) 0.03 LandPlants
AT1G43700 SUE3, VIP1 VIRE2-interacting protein 1 0.03 SeedPlants
Solyc06g049040.4.1 No alias transcription factor (bZIP) 0.03 SeedPlants
Zm00001e018460_P001 No alias transcription factor (bZIP) 0.06 SeedPlants
Zm00001e024638_P002 No alias transcription factor (bZIP) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004827 bZIP 164 221
No external refs found!