Aev_g12545 (AMY1, ATAMY1)

Aliases : AMY1, ATAMY1

Description : alpha amylase & original description: none

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g12545

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00105470	AMY3, ATAMY3,...	Carbohydrate metabolism.starch...	0.03	OrthoFinder output from all 47 species
AT1G69830	AMY3, ATAMY3	alpha-amylase-like 3	0.02	OrthoFinder output from all 47 species
Als_g49597	AMY3, ATAMY3	alpha amylase & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g18360	AMY3, ATAMY3	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20696	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g67761	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g16674	AMY3, ATAMY3	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g22120.1	AMY2, ATAMY2	alpha amylase	0.02	OrthoFinder output from all 47 species
Mp3g22820.1	AMY3, ATAMY3	alpha amylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	176	471
IPR012850	A-amylase_bs_C	492	552

External Links

No external refs found!