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  5. Ppi_g43948

Ppi_g43948 (ATAPG7, APG7, ATG7, ATATG7)


Aliases : ATAPG7, APG7, ATG7, ATATG7

Description : autophagosome E1 ATG8/12 ubiquitin-activating enzyme *(ATG7) & original description: none


Gene families : OG0007255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g43948

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021318.56 ATAPG7, APG7,... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.01 OrthoFinder output from all 47 species
MA_58836g0010 ATAPG7, APG7,... ATG7 autophagosome ATG8/12-activating E1 protein 0.03 OrthoFinder output from all 47 species
Mp2g07850.1 ATAPG7, APG7,... ATG7 autophagosome ATG8/12-activating E1 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032197 Atg7_N 10 323
IPR000594 ThiF_NAD_FAD-bd 337 587
No external refs found!