Ppi_g43870

Description : not classified & original description: none

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g43870
Cluster	HCCA: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
AT1G14200	No alias	RING/U-box superfamily protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene33056.t1	Aspi01Gene33056	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc12g008440.1.1	Solyc12g008440	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e010857_P001	Zm00001e010857	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0042586	peptide deformylase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	7	36
IPR001841	Znf_RING	216	257

External Links

No external refs found!