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  5. Ppi_g43572

Ppi_g43572 (FAS4, ATFAS4)


Aliases : FAS4, ATFAS4

Description : not classified & original description: none


Gene families : OG0005211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g43572

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G059400.1 FAS4, ATFAS4,... not classified & original description: pacid=50588370... 0.03 OrthoFinder output from all 47 species
Spa_g10332 FAS4, ATFAS4 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011709 DEAD-box_helicase_OB_fold 1095 1186
IPR011545 DEAD/DEAH_box_helicase_dom 343 512
IPR001650 Helicase_C 714 806
IPR007502 Helicase-assoc_dom 868 1008
No external refs found!