Description : not classified & original description: none
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g42738 | |
Cluster | HCCA: Cluster_3 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00223570 | PUB26,... | U-box domain-containing protein 26 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00043p00215340 | PUB8, B80,... | U-box domain-containing protein 8 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT3G52450 | PUB22 | plant U-box 22 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g021934 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02187 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g11423 | PUB15 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g12715 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g37093 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g01235 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g11371 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g04774 | PUB25 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g18761 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene12032.t1 | PUB25, Aspi01Gene12032 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene15171.t1 | PUB29, ATPUB29,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene18444.t1 | PUB23, Aspi01Gene18444 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene18451.t1 | PUB25, Aspi01Gene18451 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene18467.t1 | PUB23, Aspi01Gene18467 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene19337.t1 | PUB26, Aspi01Gene19337 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene19374.t1 | Aspi01Gene19374 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene43214.t1 | PUB24, Aspi01Gene43214 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene43215.t1 | PUB24, Aspi01Gene43215 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene44320.t1 | PUB23, Aspi01Gene44320 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene44328.t1 | PUB23, Aspi01Gene44328 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene51624.t1 | PUB15, Aspi01Gene51624 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene55033.t1 | PUB25, Aspi01Gene55033 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.07G004600.1 | PUB26, Ceric.07G004600 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.08G042000.1 | Ceric.08G042000 | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G007700.1 | PUB23, Ceric.10G007700 | not classified & original description: pacid=50612519... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.19G059800.1 | PUB26, Ceric.19G059800 | not classified & original description: pacid=50575490... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G045400.1 | Ceric.25G045400 | not classified & original description: pacid=50593359... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.27G047700.1 | PUB8, B80,... | E3 ubiquitin ligase *(PUB8) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g00903 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g07515 | PUB25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g07421 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g18955 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g26825 | PUB26 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g01464 | PUB26 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g11880 | CMPG1, ATCMPG1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g16036 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g21913 | PUB26 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01026542001 | CMPG2, ATCMPG2 | U-box domain-containing protein 27 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031720001 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_02490 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Gb_02633 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Gb_19502 | PUB23 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Gb_27794 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g46500.1 | PUB23, LOC_Os02g46500 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os03g13740.1 | LOC_Os03g13740 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g13870.1 | LOC_Os06g13870 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os12g06410.1 | PUB24, LOC_Os12g06410 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Len_g01213 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g31416 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10432981g0010 | PUB22 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_415393g0010 | PUB25 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_9494855g0010 | PUB26 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Mp7g11020.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g25038 | PUB26 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g21647 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g42860 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g34239 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g00718 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g18199 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo416356 | PUB26 | U-box domain-containing protein 30 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g009330.1.1 | PUB22, Solyc01g009330 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g03410 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g15093 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g20352 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014766_P001 | CMPG2, ATCMPG2,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039417_P001 | PUB23, Zm00001e039417 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e041397_P001 | PUB23, Zm00001e041397 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
No external refs found! |