Heatmap: Cluster_3 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Sterile Frond
Fertile Frond
Young Stem with Root
Mature Stem with Root
Root
-2.77 -1.95 -1.0 0.5 1.42
-2.1 -1.72 -0.79 0.47 1.32
-4.85 -4.07 -1.08 0.53 1.58
-3.35 -3.53 -1.48 0.65 1.53
-1.57 -1.72 -0.87 0.49 1.27
- -4.1 -2.93 1.04 1.47
-6.35 -0.21 -5.39 0.68 1.32
-1.22 -0.35 -0.7 0.13 1.06
- -3.92 -2.19 0.46 1.74
-5.2 -2.49 -3.24 1.31 1.14
-1.42 -1.39 -4.06 0.99 1.14
Ppi_g21753 (GST8)
-2.03 -1.09 -0.68 0.53 1.15
- -1.03 -2.27 1.11 1.1
Ppi_g21891 (ACT11)
-4.36 -5.3 -3.88 1.25 1.31
-4.79 -3.37 -1.32 0.61 1.56
- -1.74 -2.62 1.2 1.17
- -10.33 -5.09 0.46 1.85
-4.11 -2.86 -0.8 0.63 1.43
-5.13 - -0.82 0.72 1.46
-4.77 -4.64 -2.55 1.03 1.44
- - -3.04 0.7 1.7
- -2.3 -2.41 0.73 1.56
-4.89 -2.45 -2.01 1.11 1.25
- - -3.57 1.38 1.2
-4.03 -2.24 -0.56 1.06 0.98
- - -2.66 0.45 1.8
- -1.51 - 0.71 1.59
- -3.76 -0.55 0.5 1.5
-2.9 -1.31 -2.58 1.02 1.18
Ppi_g26294 (FDH)
-3.77 -3.36 -1.7 1.19 1.17
- -2.04 -0.75 0.64 1.38
-6.33 -1.36 -3.51 0.91 1.39
- - -4.34 0.56 1.8
- -3.05 -1.92 0.9 1.46
-3.37 -2.57 -1.75 0.6 1.55
Ppi_g31259 (HT1)
-7.8 -5.45 -2.33 1.33 1.18
- -8.18 -1.68 0.85 1.53
Ppi_g32547 (CDF3)
-4.71 -2.26 -0.82 0.36 1.54
-5.99 -2.61 -2.39 1.17 1.25
-7.06 -3.4 -2.01 0.77 1.56
- - - 0.93 1.63
Ppi_g35451 (FER1)
- - - 0.5 1.84
- -0.59 - 0.52 1.54
-3.0 - - 0.32 1.86
- -0.88 - 0.74 1.48
-5.93 -3.15 -1.51 0.98 1.35
- - -0.8 0.44 1.62
- - -0.82 0.66 1.51
-5.41 -1.33 -2.12 1.19 1.05
- - -0.7 0.69 1.47
- -1.74 - 1.11 1.35
- - -1.51 0.73 1.58
-3.27 -1.25 -1.17 0.72 1.26
-3.47 - - 0.41 1.84
- - - 0.59 1.8
Ppi_g52548 (TPX1)
-3.43 -1.72 -1.09 0.98 1.11
-1.1 -0.35 -0.49 -0.03 1.04
-3.58 -3.24 -2.16 0.75 1.54
-2.75 -2.58 -1.8 0.88 1.36
- - -2.5 1.25 1.29
-5.5 -3.12 -0.51 0.77 1.29
Ppi_g61531 (GPX6)
-0.53 -0.16 -0.32 -0.01 0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.