Ppi_g42497


Description : not classified & original description: none


Gene families : OG0005057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005057_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g42497

Target Alias Description ECC score Gene Family Method Actions
Adi_g057741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30792.t1 Aspi01Gene30792 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G048500.1 Ceric.04G048500 not classified & original description: pacid=50631123... 0.03 OrthoFinder output from all 47 species
Dac_g23059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005755001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_39408 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g56630.1 LOC_Os04g56630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g30821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28016 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g47613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g45485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006657_P003 Zm00001e006657 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!