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Aliases : ATRAD21.3, SYN4
Description : not classified & original description: none
Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00066p00174610 | ATRAD21.3, SYN4,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G16270 | ATRAD21.3, SYN4 | sister chromatid cohesion 1 protein 4 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g10266 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22608 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g14846 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26395 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13918 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.31G015800.1 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component *(SCC1) of... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G042400.1 | ATRAD21.3, SYN4,... | not classified & original description: pacid=50582800... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15613 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16378 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05845 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g47046 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29051 | ATRAD21.3, SYN4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01004000001 | ATRAD21.3, SYN4 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_15721 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g67250.1 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g41110.1 | AtRAD21.1, SYN2,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g02403 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49535 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06270 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.06 | OrthoFinder output from all 47 species | |
| MA_673714g0010 | ATRAD21.3, SYN4 | Sister chromatid cohesion 1 protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g04800.1 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g20789 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09799 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0046.g013377 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Smo122410 | ATRAD21.3, SYN4 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g008740.2.1 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g52596 | ATRAD21.3, SYN4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018959_P001 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e028559_P002 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004556 | alpha-amylase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006909 | Rad21/Rec8_C_eu | 1319 | 1366 |
| No external refs found! |