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  5. Aev_g12107

Aev_g12107


Description : component *(eS1) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g12107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT3G04840 No alias Ribosomal protein S3Ae 0.02 OrthoFinder output from all 47 species
Aop_g05100 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.32G043000.1 Ceric.32G043000 component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01021836001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Gb_02289 No alias component RPS3a of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.02 OrthoFinder output from all 47 species
Msp_g05152 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g07669 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo271906 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc06g072490.3.1 Solyc06g072490 component RPS3a of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 16 221
No external refs found!