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  5. Ppi_g40451

Ppi_g40451 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g40451

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00140830 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
Aev_g41610 GLR3.3, ATGLR3.3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14918 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25107 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41855.t1 GLR3.3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41857.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41861.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41865.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54296.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64317.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64329.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene65141.t1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33613 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11749 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14399 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g02540.1 GLR3.3,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Lfl_g05008 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07325 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g15694 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430853g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Msp_g43519 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15165 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61341 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30122 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31901 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57318 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g57319 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025676 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Spa_g22526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31279 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 589 756
IPR001638 Solute-binding_3/MltF_N 488 784
IPR001828 ANF_lig-bd_rcpt 48 402
No external refs found!