1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g39074

Ppi_g39074


Description : plastidial RNA exonuclease & original description: none


Gene families : OG0006778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006778_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g39074
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AT1G34380 No alias 5'-3' exonuclease family protein 0.02 OrthoFinder output from all 47 species
Adi_g047735 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00979 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08189 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68831 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G097800.1 Ceric.01G097800 plastidial RNA exonuclease & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g15173 No alias plastidial RNA exonuclease & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21827 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034499001 No alias Cell cycle.organelle machineries.DNA replication.RNA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g65400.2 LOC_Os01g65400 plastidial exonuclease 0.02 OrthoFinder output from all 47 species
Lfl_g35691 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05680 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g017230.2.1 Solyc11g017230 plastidial exonuclease 0.03 OrthoFinder output from all 47 species
Zm00001e019106_P003 Zm00001e019106 plastidial exonuclease 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR020046 5-3_exonucl_a-hlix_arch_N 97 221
IPR020045 DNA_polI_H3TH 248 331
No external refs found!