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  5. Aev_g11762

Aev_g11762


Description : ornithine decarboxylase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g11762

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00109640 SAMDC,... Polyamine... 0.03 OrthoFinder output from all 47 species
AT3G25570 No alias Adenosylmethionine decarboxylase family protein 0.03 OrthoFinder output from all 47 species
Adi_g056998 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11416 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35112 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78784 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G041400.1 SAMDC, Ceric.34G041400 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g11559 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os09g37120.1 LOC_Os09g37120 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species
Len_g20881 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06604 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10434 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_100317g0010 SAMDC S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Nbi_g07578 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07560 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22755 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080380.4.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc04g082030.1.1 Solyc04g082030 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species
Spa_g11926 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50329 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 86 321
IPR022643 De-COase2_C 323 423
No external refs found!